Don't get TOO hung up on the warranty bit - it only applies to the drivetrain. To be realistic, you can't expect Nissan to warrant something that YOU modify.
They do cover all the other areas, however. I remember that when I had my S15 and the speedo stopped working, the Nissan service manager happily fixed it under warranty, even though it had a big mongrel terb, front mount, PFC and zaust.
I actually think that I made a sale for Nissan as they had a customer there at the time who came back from a test drive of the demo 200SX and said that it wasn't as fast as he wanted/expected. I took him for a spin in mine and he signed up that day with a list of my mods scrawled onto the bottom of the "offer to purchase"! I reckon I should have got a kick-back from that one!