An exhaust is only as good as the miniumum flowing section. I still believe that the front half of the exhuast is the most critical tho - esspecially the merge into the Catalytic converter. The air the exits from the turbine housing imparts I would think at least 30percent of its motion onto the walls of the exhuast due to the spiral action of the gases. The problem is when it gets to the catalyst is that the air has to straighten out to pass through it and the majority of the exhuast gases are acculumated at the outer edge of the cat.
A well designed exhuast will not only flow well but will hopefully reduce the exhuast valve temps. I would think that catalyst in an aftermarket exhuast would be moved further down stream to allow for the exhuast gases to straighten - this however for manufactures means that the catalyst will take longer to get up to operating temps - which is highly unwanted. And when it comes to catalyst size bigger is allways better - wait till you see the size of C63 AMG cats, they are about 7" 400cell on each bank.